Q1:
I was trying to download a subset of data from your recent paper (https://www.cell.com/cell/fulltext/S0092-8674(20)30113-6). However, the website is returning ‘not found’ error (http://pcawg.gersteinlab.org/). Especially, I am interested in ‘Gene list categories’. Therefore, I kindly request you to share relevant files listed under ‘Gene List Categories’ on the website, so I could use in my analysis.
A1:
The website works fine for me. Sure it doesn’t work ? … Please let me know which specific file are you trying to download.
Q2:
Thanks a lot for the reply.
I need the gene list categories listed under PCAWG-specific annotations (http://pcawg.gersteinlab.org/#Annotations)
Eseential Genes
Immune Response Genes
DNA repair Genes
Metabolic Genes
Cancer Pathway Genes
non-Essential Genes
cell Cycle Genes
For some reason, when I click on the link, it’s directly downloading the html file with error. It would be great if you could share these files.
A2:
You can download relevant files from the link listed below.
http://pcawg.gersteinlab.org/Datasets/Annotations/categories/