Q1:
The file in the url:
http://www.nature.com/nature/journal/v489/n7414/extref/nature11245-s1.pdf
(SI of the paper "Architecture of the human regulatory network derived from
ENCODE data") is damaged and cannot be read.

Can you please send me a copy?

A1:
The file in the url:
http://www.nature.com/nature/journal/v489/n7414/extref/nature11245-s1.pdf
(SI of the paper "Architecture of the human regulatory network derived from
ENCODE data") is damaged and cannot be read.

Can you please send me a copy?

Q2:
Thank you for your prompt reply.

The nature11245__ALL.pdf file you generated works fine (using Adobe XI on Windows 7) but as I mentioned, the file download from nature’s website is damaged (on windows and Linux machines).

FYI, here is Linux stderr (using ocular):

Error: PDF file is damaged – attempting to reconstruct xref table…

Error: Couldn’t find trailer dictionary

Error: Couldn’t read xref table

Connecting to deprecated signal QDBusConnectionInterface::serviceOwnerChanged(QString,QString,QString)

A2:
Thank you for letting us know. This is actually a more serious problem than what I had been expecting. We may need to contact them about this very soon, as other users will experience the same problem. Thanks again.

It might be a problem of fonts that mac os has but windows/linux don’t. You might want to try produce the pdf on windows and try to open it on mac os and linux and if it works just substitute the file on nature site (which is not a trivial task I guess).